Genetic Synthesis

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Alu elements are the most abundant type of retrotransposable element, and are incorporated into the genetic sequence in a copy and paste manor. ~10.7% of the genome consists of Alu elements[1]. The large amount of Alu elements in the human genome results because of how they are replicated by LINE retrotransposons[2]. After replication they look similar to RNA Polymerase III replicated DNA, or mRNA, but they are reverse transcribed from the like-mRNA sequence into a newly created Alu element that can be transposed to a target sequence in the genome. Due to the vast amount of Alu elements, they contribute to genetic diversity and disease by inserting into sensitive portions of the genome that can result in mutagenesis. In my chosen case study, …show more content…

The assessment included ophthalmologic, audiologic, and general physical examinations, as well as serum chemistries and routine urinalysis. Peripheral blood samples was extracted from the patients, their unaffected siblings, and their parents. The genomic DNA from all samples was amplified with ALMS1 exon 16-specific primers, and products were purified and sequenced using the 3730×l DNA Analyzer. In the results, the researchers compared two patients from a highly consanguineous kindred from the small village, in which they both had the syndrome caused by homozygous inheritance for an identical insertion of 333 bp in exon 16 of ALMS1 gene. By studying the transposable sequence, it was discovered that it belonged to the class of Alu Ya5 elements. When compared to the wild-type ALMS1 allele, the ALMS1Alu allele had a target site duplication which is characteristic of the Alu insertion mechanism. The long uninterrupted stretch of adenosine suggests that the sequence was inserted by a retrotransposable event. Heterozygous carriers of the mutated insertion was identified by haplotype analysis with chromosome 2p13-specific microsatellite markers and confirmed by PCR genotyping for the presence of the Alu allele. The wild type allele PCR product size is 313 bps, whereas the Alu allele PCR product size is 646

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