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Importance of genetic variation
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The main focus of this paper (Siddal et al. 2007) was to use various molecular techniques (discussed in detail later) as a means of identifying what Hirudo species are available commercially as medicinal leeches. While at least five species of medicinal leeches have been recognized, they are almost indistinguishable morphologically. Although historically there has been extensive use of leeches medicinally, only Hirudo medicinalis has been approved by the United States Food and Drug Administration (US FDA). The goals for determining the various species of Hirudo available commercially are as follows: maintaining accordance with US FDA regulations on these commercially available organisms; ensuring correct identification of H. medicinalis as a model organism for research; and extending conservation efforts to other species of Hirudo unknowingly used for medicinal purposes.
Thirteen individuals of both H. medicinalis and H. verbana were collected and identified by dorsal color patterning. Along with wild individuals, commercially available specimens were collected from four separate suppliers and from two labs where H. medicinalis is used as a model organism. Molecular data was provided via DNA barcoding and nuclear microsatellites. Microsatellite data can be used to distinguish between individuals of the same species and show genetic variablility between closely related taxa.
Wild and commercially available individuals were sampled with nine loci (HcA10, HvH08, Hm8, Hm10, Hm12, Hv351, HvT379, Hm1, and Hm2) to help in determination their species placement. Amplification of these loci was performed via polymerase chain reactions (PCRs) with various primer sets. Microsatellite data was also subjected to computational analysis of popu...
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...isms can have many detrimental effects on research conducted today and in the future. Hopefully, studies like these will become more common. Molecular profiling of model organisms should become commonplace in the commercial distributions of these organisms (as suggested by the author).
A total of 38 papers were cited in the reference section. Many of the citations came from the published work of the authors of this paper. The dates of these references ranged from monographs published in the early 1800s (1827 the earliest) to recent research published on leeches as model organisms (latest in 2006).
Works Cited
Siddal, M. E., Trontelj, P., Utevsky, S. Y., Nkamany, M. & Macdonald III, K. S. 2007 Diverse molecular data demonstrate that commercially available medicinal leeches are not Hirudo medicinalis. Proc. R. Soc. B. 273, 1481-1487. (doi:10.1098/rspb.2007.0248)
After 48 hours of incubation the agar plates were viewed. Individual colonies were tested for successful isolation by gram staining and then viewing the stained bacteria under a microscope. Isolation was successful. One colony of each unknown bacteria was transferred to an agar slant for growth. The agar slants were stored at room temperature over the weekend so that they would not grow too much.
For the original analysis, the corrected pairwise distance will be calculated using the Jukes–Cantor and the Maximum Composite Likelihood Model. The Jukes–Cantor model assumes that the rate of nucleotide substitution or all nucleotides (C, A, T and G) are equal, that nucleotide frequencies are equal, that there is an equal rate of substitution among sites, and does not correct for the lower rate of transversion substitutes in comparison to transitional substitutions (Jukes and Cantor, 1969). The Maximum Composite Likelihood takes into account the phylogenic relationship between sequences, using the sum of the log likelihoods of the bases as the composite likelihood. Both pair wise distances and substitution parameters are estimated using the Maximum Composite Likelihood (Tamura et al. 2004). Both models should yield different maximum sequence divergence and average divergence that can then be compared to the original paper. With sequence divergence data, the temporal origin of the genus can be identified. The two alternate models to the Kimura-2 parameter will be analyzed to discuss which methods yield results closest to the expected time origin of the genus
Today’s article will take an objective look at the Echinacea plant and why some people take supplements, believing it will help them fight the germs.
The hop, Humulus lupulus, is a cultivated flowering plant, green in color that has many economically important roles. The hop belongs to the hemp family, Cannabinaceae. There are many features that are distinctive about this plant. A hops plant has yellow lupulin glands between the petals, which is used for preservative and flavoring characteristics in beer. The bitterness of the hop is used to balance the sweetness of the malt, and the essential oils add a flavor and aroma which cannot be achieved by using any other plant. The hop plant is a perennial spiraling vine, which will grow in almost any climate given enough water and sunlight. It can climb either string or poles and can reach height of 40 feet. The flowers are usually dried before use. Farmers have developed a systemic approach to the cultivation of hops. There are also a number of chemical compounds present in this plant that give rise to its economic value. (1)
The carnivorous worm Hirudo medicinalis, commonly known as a leech, has recently been approved by the FDA as a medicinal device. In June, 2004 the FDA gave the French company Ricarimpex SAS a license to market leeches for medical use in the United States. Leeches are commonly used post-operatively in reconstructive surgery. It is difficult for ruptured veins to rejoin after surgery without any vessels to drain blood away. This can cause cells to die from oxygen deprivation. Leeches can eliminate this by sucking the pooled blood, which allows the body to re-establish the network of blood vessels (Pilcher 2004). There are also recent studies being done on the use of leeches in the treatment of osteoarthritis. This condition occurs when cartilage in the knee joint breaks down. This causes a great ...
The Artemia franciscana can survive in extreme conditions of salinity, water depth, and temperature (Biology 108 laboratory manual, 2010), but do A. franciscana prefer these conditions or do they simply cope with their surroundings? This experiment explored the extent of the A. franciscanas preference towards three major stimuli: light, temperature, and acidity. A. franciscana are able to endure extreme temperature ranges from 6 ̊ C to 40 ̊ C, however since their optimal temperature for breeding is about room temperature it can be inferred that the A. franciscana will prefer this over other temperatures (Al Dhaheri and Drew, 2003). This is much the same in regards to acidity as Artemia franciscana, in general thrive in saline lakes, can survive pH ranges between 7 and 10 with 8 being ideal for cysts(eggs) to hatch (Al Dhaheri and Drew, 2003). Based on this fact alone the tested A. franciscana should show preference to higher pH levels. In nature A. franciscana feed by scraping food, such as algae, of rocks and can be classified as a bottom feeder; with this said, A. franciscana are usually located in shallow waters. In respect to the preference of light intensity, A. franciscana can be hypothesized to respond to light erratically (Fox, 2001; Al Dhaheri and Drew, 2003). Using these predictions, and the results of the experimentation on the A. franciscana and stimuli, we will be able to determine their preference towards light, temperature, and pH.
Many plants and plant derived products are used in cancer therapy as cytotoxic agents. Examples include Taxol that is used for breast cancer (which gets its active constituent from Pacific Yew tree) and the vinca alkaloids used for leukaemia (from the Madagascar ...
One of the major aspects of biodiversity is its assessment, which is nominated by its resources. Much concentration in drug plants was evinced during the early period of civilization. The use of plants for remedial purpose various human ailments and has prominently figured in ancient manuscripts such as ‘The Rigvedas’,‘The Bible’, ‘The Iliad’, ‘The Odyssey’, ‘The Sushrutsamhita’ and ‘The History of Herodotus’. The ancient Chinese were by means of drug plants more than six centuries ago. They were the pioneers in using plants as a valuable source of medicine.
This paper analyzes whether or not gene to map distance in Sordaria fimicola is affected by changes in environmental conditions. The main focus is on how temperature affects the recombination frequency in this organism. It is analyzed if under different environmental conditions wt x gray and wt x tan varies in their percent crossing over. It is investigated how factors such as temperature and ultraviolet light have affected the gene to centromere distance in Sordaria. Results obtained in lab as well as scientific researches prove that as temperatures increases the percent of crossing over increases as well.
The literature does provide evidence for my hypothesis and also provides a clearer picture as to how frequent and to what extent the interbreeding is believed to occur. Examining these articles will introduce the new findin...
Caplan M. Geralyn. DNA Isolation Lab. Owensboro Community & Technical College, n.d. Web. 5 April 2014.
Grumbine also explores other biological treatments like leech therapy, and the effects that medical leeches have on their patients. Usually, medications were used to control chronic pain, such as sleep medications and antidepressants. Now it has been observed that leeching prevents blood clotting and severe burning pain. The ingredients of leech saliva help stabilize cellular membranes and the overall well-being of the skin and body functions improve. As blood flow increases and improves circulation, the arteries, veins and capillaries dilate, and there is a reduction of oedema, shunting and congestion.
There are various computer programs that can aid in sequencing these segments of DNA and generate phylogenetic trees. The programs are specifically looking for intron indels, retroposon, gene duplications and linked genes (Rokas and Holland 2000). Researchers can use several supermatrix formations that have already been created to pair up species (Gatesy et al. 2012). In our example, DNA was extracted, purified and then sequences. The computer program was looking for the presence or absence of transposon sites when compared to one of the supermatrix formations(Gatesy et al. 2012). Additionally, as the computer program runs the sequences gathered from the whale and hippopotamus the sequences will align allowing for additional differences and similarities in the genetic code to be found. After the genetic code has been sequenced, the computer programs can run programs to make phyogenetic
There is a large body of research into herbal medicines. Great progress has been made in the isolation and identification of the constituents of medicinal plants using high pressure liquid chromatography and gas chromatography. Research to identify the main active components is carried out either in a search for new drugs or to enable claims to be made for proprietary herbal preparations. Medicinal plants have been generally shown to have not one but a combination of active principles. Once these principles are found, the next step is learning how to synthesize it
Digitalis purpurea, commonly known as the foxglove is one of the deadliest but at the same time most medicinal plants in our world. This flowering plant is very widespread being found in much of temperate Europe and parts of North America. While, the leaves, flowers, and seeds are all poisonous to us and other animals, compounds have been extracted from the species and are used in heart medicines and other medicinal products that we still use today. The foxglove can grow in very little soil and can often be found in many cracks and crevices making it a very common and recognizable plant species (Royal Botanic Gardens, 2011).